That Spicy Chick

Chocolate Cottage Cheese Muffins

These easy to make flourless Chocolate Cottage Cheese Muffins are healthy, gluten-free and high in protein. They’re soft and moist, full of delicious chocolate flavors and perfect for a quick snack, dessert, or grab and go breakfast!



 

Looking for more healthy baked treats or breakfasts? Try my Single Serve Chocolate Protein Banana Bread, Apricot Almond Oat Bars, or these Chocolate Hazelnut Baked Oats next!

About This Recipe

These double chocolate cottage cheese muffins are easy to make and incredibly delicious!

Cottage cheese in chocolate muffins might sound like a strange idea but not only does it make these muffins soft and fluffy by adding moisture, it boosts the protein content.

These healthy cottage cheese muffins are:

  • Gluten-free. They’re made with oat flour instead of all-purpose flour.
  • Made without oil or butter. But are still incredibly moist, light and fluffy!
  • Mostly refined sugar free. All the ingredients are sugar-free except Guittard’s large yummy baking chocolate chips! You can of course use sugar-free chocolate chips if you’d like to make them completely free of added sugars.
  • Low in calories! Each muffin has just 104 calories and 4.6 grams protein!

Cocoa powder and chocolate chips give these chocolate oatmeal muffins a decadent and rich chocolate flavor that chocolate lovers will love.

Sliced double chocolate cottage cheese muffin to show moist inside.

Small Batch

I intentionally made this a small-ish batch muffin recipe (this recipe yields 8 muffins) and slightly smaller in size than your average bakery muffins. This way you can enjoy them as a low-calorie healthy snack or dessert and satisfy your chocolate cravings!

Or if you want to have them as breakfast muffins, start off your day right with two or more muffins for a protein-packed and satiating breakfast!

For another cake like tasting breakfast option with cottage cheese, try my Cottage Cheese Baked Oats!

Why This Recipe Works

  • Easy to make. These muffins are a low-effort and low-maintenance baked treat! They come together in minutes and you don’t need any special equipment like an electric hand mixer or blender!
  • Amazing texture. These chocolate cottage cheese muffins flour muffins are super moist, soft and fluffy!
  • Healthy! They’re a great nutritious snack or dessert and will satisfy your craving for something chocolatey and sweet! You can also eat two or three for a protein-packed healthy breakfast!
  • High protein, high fiber and low calorie. Thanks to cottage cheese, these chocolate oatmeal muffins pack a protein punch. Oat flour makes them high in fiber too. Since they’re not very big, they are also low in calories!
  • Adaptable for various diets. They’re naturally gluten-free and can be made dairy-free, refined sugar-free, and vegan if needed.

Ingredient Notes and Substitutes

Labeled ingredients for chocolate muffins with cottage cheese on a wood board.
  • Oat Flour: Use store-bought oat flour for the best soft and fluffy muffins. Homemade oat flour made from blended oats won’t be as finely ground as store-bought. While it will still work for this recipe, the muffins will be slightly denser if using it.
  • Natural Unsweetened Cocoa Powder: I used Hershey’s but any high quality unsweetened cocoa powder such as the ones from Ghirardelli or Guittard will taste great. Make sure it’s a natural cocoa powder and not Dutch process. The muffins won’t rise much if using the latter.
  • Baking Powder & Baking Soda: Leavening agents to make the muffins rise.
  • Low Fat Cottage Cheese: Adds moisture and protein. Use small curd cottage cheese. I add it without blending as the texture is undetectable once baked. The small curds also get mostly covered up by the cocoa powder. You can blend it first or with the wet ingredients if you prefer.
    Unsweetened Apple Sauce: Adds sweetness and moisture. It also eliminates the need for oil or butter.
  • Liquid Egg Whites: From a carton or from 2 large eggs. It provides structure and helps the muffins rise.
  • White Sugar Replacement: I used Lakanto Monkfruit Sweetener. Or you can use regular granulated white sugar or other granulated sugar substitute made from stevia, allulose, monkfruit, etc. See the ‘Variations’ section below if you’d like to use a natural sweetener like maple syrup.
  • Brown Sugar Replacement: I used Swerve Brown Sugar. Substitute with light brown sugar, coconut sugar or other sweetener of choice.
  • Unsweetened Almond Milk: I like unsweetened vanilla almond milk but cow’s milk or other dairy-free milk can be substituted.
  • Semisweet Chocolate Chips: Or chocolate chunks. Substitute with bittersweet, milk or dark chocolate chips. Use sugar-free chocolate chips to make these muffins free of refined sugar.

Full ingredient list and amounts are in the recipe card below.

Double chocolate chip cottage cheese muffins on a white plate.

How to Make Chocolate Cottage Cheese Muffins

Below is a step-by-step overview on how to make this cottage cheese muffins recipe. Keep scrolling down to get to the recipe card below with the full recipe and detailed instructions!

Prep. Preheat oven to 220°C / 425°F. Line a 12-count nonstick muffin pan with 8 muffin liners. Fill the rest of the empty muffin cups with water to promote even baking.

Dry ingredients for cottage cheese muffins whisked together in a bowl.
1. Combine the dry ingredients. In a medium bowl, whisk together the oat flour, unsweetened cocoa powder, baking powder, baking soda and salt.
Wet ingredients mixture and a silicone spatula for chocolate cottage cheese muffins in a mixing bowl.
2. Combine the wet ingredients. In another medium mixing bowl, mix together the cottage cheese, egg whites, unsweetened applesauce, sugar substitutes, unsweetened almond milk and vanilla extract with a silicone spatula until evenly combined.
Chocolate cottage cheese oatmeal muffin batter with chocolate chips in a mixing bowl.
3. Combine dry and wet ingredients. Add the dry ingredients mixture into the bowl with the wet ingredients and mix until everything is evenly incorporated. Fold in most of the chocolate chips.
Chocolate cottage cheese muffin batter sprinkled with chocolate chips in muffin liners lined muffin tin.
4. Scoop and divide batter. Divide the batter into the prepared muffin pan, filling the muffin liners halfway full. Sprinkle with the remaining chocolate chips.
Baked healthy chocolate protein cottage cheese muffins in a muffin pan.
5. Bake. Bake for 5 minutes until the muffins have slightly risen, then reduce the temperature to 175°C/350°F without opening the oven door and bake for a further 13-16 minutes. The muffins are done when a toothpick inserted into the center comes out clean.
Closeup of double chocolate cottage cheese muffins on a wire rack.
6. Cool. Cool for 5 minutes in the muffin pan, then transfer to a wire cooling rack to cool completely or until ready to eat. Enjoy warm or at room temperature!

Storing and Reheating Leftover Muffins

  • Storing: Store leftover muffins in a sealed airtight container in the fridge for up to 1 week or in a cool dry area for up to 3 days.
  • Reheating: To warm up these chocolate cottage cheese muffins, place in a bowl in a microwave and cover the top with a paper towel. Heat on high for 20-30 seconds or until warm.

Cook’s Tips

  • Fill the empty muffin cups with water. This will promote even baking and protect your muffin pan from warping.
  • Don’t overmix. Overmixing will cause the batter to thicken too much and the oats to rapidly absorb the liquid. Although no gluten will form, it can lead to denser muffins if there isn’t sufficient liquid.
  • Use an immersion blender. If your kids are picky eaters and won’t touch these cottage cheese muffins if they spot a white speck of cottage cheese, use an immersion blender to blend the wet ingredients until smooth.
  • Make blender cottage cheese muffins. You can use rolled oats or quick oats instead if making blender muffins. Blend all the ingredients except the chocolate chips in a blender, scraping down the sides as needed, until a smooth batter consistency is achieved. Stir in most of the chocolate chips until evenly distributed. Evenly divide the batter between the 8 muffin liners in the prepared muffin pan. Sprinkle with the remaining chocolate chips and bake as indicated.
  • Add more oat flour and almond milk if needed. If the batter is too thick, stir in 1 tablespoon of almond milk at a time. If you lift your spatula and the batter drips back into the bowl, it’s just right. If it doesn’t and sticks to the spatula, you need more liquid. If it’s too runny, add 1 tablespoon of oat flour at a time to thin it out.
  • Make 12 muffins. Multiply the ingredient amounts by 1.5 (1-½).
Front view closeup of chocolate cottage cheese muffins on a plate.

Variations   

Dietary Modifications

  • Gluten-free. This oatmeal muffins recipe is gluten-free as written. Use gluten-free certified oats if you have sensitivities and want to ensure there is no crossover contamination.
  • Eggless. Use Bob’s Red Mill gluten-free egg replacer, a flax egg or chia egg. 1 tablespoon of ground flaxseed or chia seeds mixed with 3 tablespoons can replace 1 egg white. (So 2 tablespoons of flaxseed/chia seeds mixed with 6 tablespoons of water for this recipe).
  • Vegan/Dairy-free. Use a plant-based Greek yogurt or non-dairy yogurt (such almond or coconut yogurt), make it eggless (see note above) and use dairy-free chocolate chips. Note that you may need more oat flour if using a vegan yogurt.
  • Sugar-free. This recipe is free of refined sugars except for the chocolate chips. You’re welcome to use sugar-free chocolate chips but I find that some brands don’t hold their shape as well as regular sweetened chocolate chips when baked.

Flavor/Preference Customization

  • Add protein powder. Adding chocolate or unflavored protein powder will boost the protein in these muffins. You’ll need to add additional liquid if doing so and the amount will vary depending on if you’re using a whey, plant-based, of whey-casein protein powder. A plant-based protein powder will require more milk than if using a pure whey protein powder due to different thickness.
  • Add instant espresso powder. Half a teaspoon will bring out the rich chocolate flavors without making the muffins taste like coffee.
  • Use full-fat cottage cheese. The recipe should work the same and the muffins will be more moist.
  • Use a natural liquid sweetener. If using a natural liquid sweetener such as maple syrup, honey, or agave syrup, add a little more oat flour to prevent the batter from becoming too runny.
  • Add nuts. Chopped walnuts, almonds, pecans, cashews, hazelnuts or any other nuts you love can be stirred into the batter.
  • Use Greek yogurt. I haven’t tested switching out the cottage cheese for Greek yogurt but you will likely need more oat flour if doing so.
  • Use different chocolate chips. Peanut butter baking chips, dark chocolate chips, milk chocolate chips, etc. I like using large Guittard semi sweet baking chocolate chips, but mini chocolate chips can be used too.
  • Top with other nut butter or seed butter. A drizzle of peanut butter, almond butter, cashew butter, sunflower seed butter or tahini would be delicious!

FAQs

Can I freeze cottage cheese muffins?

Yes. Allow to cool completely then place on a baking sheet pan. Freeze for 2 hours or so, until they have hardened. Then transfer to a sealable zipper bag and freeze for up to 3 months. Defrost overnight in the refrigerator. Reheat in the microwave for 20-30 seconds on high to enjoy warm if desired.

Can I use all-purpose flour or other gluten-free flours?

This recipe was formulated with oat flour and without further testing, I cannot advise if other flours will work. You’ll likely need to adjust the other ingredient amounts to keep the same consistency if using all-purpose flour, whole wheat flour, or any other gluten-free flour.

Can I add almond flour?

Almond flour would yield a moist and soft crumb if added in the right quantity. However, without further testing, I cannot advise on how much almond flour to add. If you’re looking for a chocolate baked treat with almond flour, make my tried and tested Single Serve Chocolate Protein Banana Bread which is made from oat flour and almond flour.

Pin it for Later!

Chocolate chip muffins with cottage cheese on a plate. Text overlay "Chocolate Cottage Cheese Muffins", "Double Chocolate | 104 Cal | 4.6G Protein"

MADE THIS RECIPE? Please leave a comment and a ⭐️⭐️⭐️⭐️⭐️ star rating below and let me know how you liked it! You can also take a photo and tag it with @thatspicychick on Instagram and hashtag it #thatspicychick. I love seeing your creations!

STAY CONNECTED! You can also follow me on PinterestFacebook or Instagram.

Sign up for my email list to get my latest recipe in your inbox weekly!

Print

Chocolate Cottage Cheese Muffins

Closeup of double chocolate cottage cheese muffins on a wire rack.
Save Recipe

5 Stars 4 Stars 3 Stars 2 Stars 1 Star

No reviews

These easy to make Chocolate Cottage Cheese Muffins are healthy, gluten-free and high in protein. They’re soft and moist, full of delicious chocolate flavors and perfect for a quick snack, dessert or grab and go breakfast!

  • Author: Lavina
  • Prep Time: 10
  • Cook Time: 22
  • Total Time: 32 minutes
  • Yield: 8 Muffins 1x
  • Category: Desserts
  • Method: Bake
  • Cuisine: American
  • Diet: Gluten Free

Ingredients

Scale
  • ¾ cup / 75 grams Oat Flour (store-bought recommended – note 1)
  • ¼ cup / 24 grams Natural Unsweetened Cocoa Powder (such as Hershey’s)
  • ⅛ teaspoons Fine Sea Salt
  • ½ TSP Baking Powder
  • ½ TSP Baking Soda
  • ½ cup / 115 grams Low Fat Cottage Cheese (small curd, optional to blend but not necessary – note 2)
  • ¼ cup / 60 grams Unsweetened Apple Sauce
  • ¼ cup / 60 grams Liquid Egg Whites (or use egg whites from 2 large eggs)
  • ⅛ cup / 24 grams White Sugar Replacement (such as Lakanto Monkfruit Sweetenernote 3)
  • ⅛ cup / 24 grams Brown Sugar Replacement (or light brown sugar, I used Swerve Brown Sugarnote 4)
  • 3 TBSP / 45ml Unsweetened Almond Milk (I use unsweetened vanilla almond milk)
  • 1 TSP Vanilla Extract
  • ⅓ cup/ 56 grams Semi-Sweet Chocolate Chips (or chocolate chunks, substitute with milk or dark chocolate chips)

Instructions

  1. Prep: Preheat oven to 220°C / 425°F. Line a 12-count muffin pan with 8 paper or silicone muffin liners. Fill the rest of the empty muffin cups with water to promote even baking and protect your muffin pan from warping.
  2. Combine the dry ingredients: In a medium bowl, combine the oat flour, unsweetened cocoa powder, baking powder, baking soda and fine sea salt. Whisk until fully incorporated, then set aside.
  3. Combine the wet ingredients: In another medium mixing bowl, mix together the low-fat cottage cheese, liquid egg whites, unsweetened apple sauce, white sugar replacement, brown sugar replacement, unsweetened almond milk and vanilla extract with a silicone spatula until evenly combined.
  4. Combine dry and wet ingredients: Add the dry ingredients mixture into the bowl with the wet ingredients. Mix until everything is evenly incorporated and combined well.
  5. Fold in the chocolate chips: Fold in most of the chocolate chips until just combined.
  6. Scoop and divide batter: Use a cookie scoop (or spoon) to scoop the batter into the prepared muffin pan, filling the muffin liners about halfway full. Sprinkle the remaining chocolate chips evenly on top.
  7. Bake: Bake for 5 minutes at 220°C / 425°F, until the muffins have slightly rise. Then reduce the temperature to 175°C / 350°F without opening the oven door and bake for a further 13-16 minutes, or until toothpick inserted into the center of a muffin comes out clean.
  8. Cool: Allow to cool for 5 minutes in the muffin pan, then transfer to a wire cooling rack to cool completely or until ready to eat. Enjoy warm or at room temperature.
  9. Store: Store leftover muffins in a sealed airtight container in the refrigerator for up to 1 week or in a cool dry area for up to 3 days.

Notes

  1. Oat Flour. I recommend using store-bought oat flour as the texture of the muffins will be more fluffy and soft. Homemade oat flour (made from blended rolled oats or quick oats) can’t be as finely ground as store-bought even if using a powerful high-speed blender or food processor. While it will still work in this recipe, the muffins will be slightly denser.
  2. Use an immersion blender. If your kids are picky eaters and won’t touch these cottage cheese muffins if they spot a white speck of cottage cheese, use an immersion blender to blend the wet ingredients until smooth. Then mix in the dry ingredients.
  3. White Sugar Replacement. Feel free to use regular granulated white sugar or other sugar-free sweetener made from stevia, allulose, monkfruit, etc. If using a liquid sweetener such as maple syrup or honey, you’ll need to add 1-2 tablespoons of oat flour in order to prevent the batter from becoming too runny.
  4. Brown Sugar Replacement. Feel free to use regular light brown sugar, coconut sugar or other sugar-free sweetener. Again, if substituting with a liquid sweetener, you’ll need to add additional oat flour.
  5. To make 12 muffins: Multiply the recipe ingredient quantities by 1.5.
  6. Make blender cottage cheese muffins. You can use rolled oats or quick oats instead if making blender muffins. Blend all the ingredients except the chocolate chips in a blender, scraping down the sides as needed, until a smooth batter consistency is achieved. Stir in most of the chocolate chips until evenly distributed. Divide the batter evenly between the 8 muffin liners in the prepared muffin pan. Sprinkle with the remaining chocolate chips and bake as indicated.
  7. To Freeze: Allow to cool completely then place on a baking sheet pan. Freeze for 2 hours or so, until they have hardened. Then transfer to a sealable zipper bag and freeze for up to 3 months. Defrost overnight in the refrigerator. Reheat in the microwave for 20-30 seconds on high to enjoy warm if desired.
  8. See “Cook’s Tips” and “Variations” for more tips and if you’d like to customize this recipe.

Nutrition

  • Serving Size: 1 Muffin
  • Calories: 104
  • Sugar: 5g
  • Sodium: 205.8mg
  • Fat: 3g
  • Saturated Fat: 1.4g
  • Unsaturated Fat: 1.6g
  • Trans Fat: 0g
  • Carbohydrates: 15.1g
  • Fiber: 3.6g
  • Protein: 4.6g
  • Cholesterol: 1.9mg

This post may contain affiliate links. We are a part of the Amazon Services LLC Associates Program, an affiliate advertising program designed to provide a means for us to earn a small commission (at no extra cost to you) by linking to Amazon.com and affiliated sites. The nutritional information provided is approximate and can vary based on several factors. It should only be used as a general guideline. For more information, please see our Disclosure.

Leave a Reply

Your email address will not be published. Required fields are marked *

Recipe rating 5 Stars 4 Stars 3 Stars 2 Stars 1 Star